Soft-clipped reads vs. improperly aligned reads at a structural variant... | Download Scientific Diagram
Reads filtering · Issue #879 · igvteam/igv.js · GitHub
IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis | Scientific Reports
Identify insertions with IGV
ClipCrop: a tool for detecting structural variations with single-base resolution using soft-clipping information | BMC Bioinformatics | Full Text
QC Fail Sequencing » Soft-clipping of reads may add potentially unwanted alignments to repetitive regions
SUMO - NGS Utilities
eKLIPse: a sensitive tool for the detection and quantification of mitochondrial DNA deletions from next-generation sequencing data - Genetics in Medicine
QC Fail Sequencing » Soft-clipping of reads may add potentially unwanted alignments to repetitive regions
Assessment of mapping strategies for determining the 5□-end of mRNAs and long-noncoding RNAs with short read sequences | bioRxiv
VarDict: a novel and versatile variant caller for next-generation sequencing in cancer research. - Abstract - Europe PMC
SIns: A Novel Insertion Detection Approach Based on Soft-Clipped Reads | Genetics - Frontiers
The formation of soft-clipped reads. Soft-clipped reads span the... | Download Scientific Diagram
Soft-clipped reads vs. improperly aligned reads at a structural variant... | Download Scientific Diagram
QC Fail Sequencing » Soft-clipping of reads may add potentially unwanted alignments to repetitive regions
Frontiers | MATCHCLIP: locate precise breakpoints for copy number variation using CIGAR string by matching soft clipped reads | Genetics
![PDF] Socrates: identification of genomic rearrangements in tumour genomes by re-aligning soft clipped reads | Semantic Scholar](https://d3i71xaburhd42.cloudfront.net/16b34a01c549bc1b12b6c5a17e85e1db117f26e3/2-Figure1-1.png "PDF] Socrates: identification of genomic rearrangements in tumour genomes by re-aligning soft clipped reads | Semantic Scholar")
PDF] Socrates: identification of genomic rearrangements in tumour genomes by re-aligning soft clipped reads | Semantic Scholar
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Discordant reads are blue (plus strand) or red (minus strand). Soft... | Download Scientific Diagram
Challenges and importance of mid-sized deletion identification for genomic medicine - SeqOne Genomics
Robust mapping of polyadenylated and non-polyadenylated RNA 3′ ends at nucleotide resolution by 3′-end sequencing - ScienceDirect
First steps with NGS data
QC Fail Sequencing » Soft-clipping of reads may add potentially unwanted alignments to repetitive regions
Soft-clipped reads vs. improperly aligned reads at a structural variant... | Download Scientific Diagram
Alignment with STAR | Introduction to RNA-Seq using high-performance computing - ARCHIVED
Soft-clipped reads vs. improperly aligned reads at a structural variant... | Download Scientific Diagram
